ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lexD1 - ECOD Domain | ECOD

ECOD/Domains/e5lexD1

e5lexD1

UID: 001871858

PDB

Range: D:9-241
PDB: 5LEX chain D(all domains)
UniProt: P28066 (all domains)
Gene: PSMA5

Molecule: Proteasome subunit alpha type-5

3D Structure

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Related Domains

Browse other domains in Proteasome,Proteasome_A_N →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome,Proteasome_A_N(210.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Pentaethylene glycol)

Pentaethylene glycol1PE
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

PF10584Proteasome_A_N

Proteasome subunit A N-terminal signature

ClanCL0052NTN

External Links

ECOD PDB View: 5LEX RCSB PDB: 5LEX PDBe: 5LEX UniProt: P28066

Downloads

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