ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jykB2 - ECOD Domain | ECOD

ECOD/Domains/e4jykB2

e4jykB2

UID: 001873863

PDB

Range: B:87-212
PDB: 4JYK chain B(all domains)
UniProt: P0ACU2 (all domains)
Gene: rutR

Molecule: HTH-type transcriptional regulator RutR

3D Structure

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Related Domains

Browse other domains in TetR_C_3 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTetracyclin repressor-like, C-terminal domain(191)

HH-groupTetracyclin repressor-like, C-terminal domain(191.1)

TT-groupTetracyclin repressor-like, C-terminal domain(191.1.1)

FFamilyTetR_C_3(191.1.1.5)

Ligands

in contact, ≤ 4 Å

UracilURA
drugDrugBank DB03419

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF08362TetR_C_3

YcdC-like protein, C-terminal region

ClanCL0174TetR_C

External Links

ECOD PDB View: 4JYK RCSB PDB: 4JYK PDBe: 4JYK UniProt: P0ACU2

Downloads

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Drug annotations from DrugDomain.