ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4p1lA1 - ECOD Domain | ECOD

ECOD/Domains/e4p1lA1

e4p1lA1

UID: 001874302

PDB

Range: A:35-152,A:243-336
PDB: 4P1L chain A(all domains)
UniProt: Q1QUN2 (all domains)
Gene: dctP

Molecule: TRAP dicarboxylate transporter, DctP subunit

3D Structure

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Related Domains

Browse other domains in DctP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyDctP(7523.1.1.16)

Ligands

in contact, ≤ 4 Å

beta-D-glucuronic acidBDP
drugDrugBank DB03156

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Bacterial extracellular solute-binding protein, family 7

ClanCL0177PBP

External Links

ECOD PDB View: 4P1L RCSB PDB: 4P1L PDBe: 4P1L UniProt: Q1QUN2

Downloads

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Drug annotations from DrugDomain.