ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2w55H4 - ECOD Domain | ECOD

ECOD/Domains/e2w55H4

e2w55H4

UID: 001875000

PDB

Range: H:125-377
PDB: 2W55 chain H(all domains)
UniProt: O54051 (all domains)
Gene: xdhB

Molecule: XANTHINE DEHYDROGENASE

3D Structure

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Related Domains

Browse other domains in MoCoBD_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMocoBD/DmpA-related(231)

HH-groupMocoBD/DmpA-related(231.1)

TT-groupMolybdenum cofactor-binding domain(231.1.1)

FFamilyMoCoBD_1(231.1.1.1)

Ligands

in contact, ≤ 4 Å

HypoxanthineHPA
drugDrugBank DB04076
Barium ionBA
metal
FE2/S2 (INORGANIC) CLUSTERFES

Pfam Families

PF02738MoCoBD_1

Molybdopterin cofactor-binding domain

ClanCL0635DmpA_ArgJ

External Links

ECOD PDB View: 2W55 RCSB PDB: 2W55 PDBe: 2W55 UniProt: O54051

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

{[(5aR,8R,9aR)-2-amino-4-oxo-6,7-di(sulfanyl-kappaS)-3,5,5a,8,9a,10-hexahydro-4H-pyrano[3,2-g]pteridin-8-yl]methyl dihydrogenato(2-) phosphate}(hydroxy)oxo(thioxo)molybdenumXAX

Shown in the structure viewer. Drug annotations from DrugDomain.