ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5h9oB1 - ECOD Domain | ECOD

ECOD/Domains/e5h9oB1

e5h9oB1

UID: 001877468

PDB

Range: B:67-117
PDB: 5H9O chain B(all domains)
UniProt: O08795 (all domains)
Gene: Prkcsh

Molecule: Glucosidase 2 subunit beta

3D Structure

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Related Domains

Browse other domains in PRKCSH-like →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupLDL receptor-like module(389.3)

TT-groupLDL receptor-like module(389.3.1)

FFamilyPRKCSH-like(389.3.1.2)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 2 additives (Formic acid, Tetraethylene glycol)

Formic acidFMT
Tetraethylene glycolPG4

Shown in the structure viewer.

Pfam Families

PF12999PRKCSH-like

Glucosidase II beta subunit-like

External Links

ECOD PDB View: 5H9O RCSB PDB: 5H9O PDBe: 5H9O UniProt: O08795

Downloads

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Drug annotations from DrugDomain.