ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5j2mA4 - ECOD Domain | ECOD

ECOD/Domains/e5j2mA4

e5j2mA4

UID: 001877530

PDB

Range: A:243-316
PDB: 5J2M chain A(all domains)
UniProt: P04585 (all domains)
Gene: gag-pol

Molecule: HIV-1 reverse transcriptase p51 subunit

3D Structure

Loading viewer...

Related Domains

Browse other domains in RVT_thumb →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyRVT_thumb(4967.1.1.9)

Pfam Families

PF06817RVT_thumb

Reverse transcriptase thumb domain

External Links

ECOD PDB View: 5J2M RCSB PDB: 5J2M PDBe: 5J2M UniProt: P04585

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure