ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ir5A4 - ECOD Domain | ECOD

ECOD/Domains/e3ir5A4

e3ir5A4

UID: 001878000

PDB

Range: A:106-220,A:582-1074
PDB: 3IR5 chain A(all domains)
UniProt: P09152 (all domains)
Gene: narG

Molecule: Respiratory nitrate reductase 1 alpha chain

3D Structure

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Related Domains

Browse other domains in Molybdopterin, NarG_dom_V →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupFormate dehydrogenase/DMSO reductase, domains 2 and 3(2003.2)

TT-groupFormate dehydrogenase/DMSO reductase, domains 2 and 3(2003.2.1)

FFamilyMolybdopterin, NarG_dom_V(2003.2.1.8)

Ligands

in contact, ≤ 4 Å

PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3,4,5,6,-TETRAHYDRO-PTERIDIN-6-YL)-2-HYDROXY-3,4-DIMERCAPTO-BUT-3-EN-YL ESTER GUANYLATE ESTERMD1
MOLYBDENUM(VI) ION6MO
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00384Molybdopterin

Molybdopterin oxidoreductase

PF28599NarG_dom_V

Nitrate reductase alpha chain, domain V

External Links

ECOD PDB View: 3IR5 RCSB PDB: 3IR5 PDBe: 3IR5 UniProt: P09152

Downloads

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