ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1y5nA1 - ECOD Domain | ECOD

ECOD/Domains/e1y5nA1

e1y5nA1

UID: 001878277

PDB

Range: A:1-105
PDB: 1Y5N chain A(all domains)
UniProt: P09152 (all domains)
Gene: narG

Molecule: Respiratory nitrate reductase 1 alpha chain

3D Structure

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Related Domains

Browse other domains in Nitr_red_alph_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFormate dehydrogenase/DMSO reductase, domain 1(1001)

HH-groupFormate dehydrogenase/DMSO reductase, domain 1(1001.1)

TT-groupFormate dehydrogenase/DMSO reductase, domain 1(1001.1.1)

FFamilyNitr_red_alph_N(1001.1.1.3)

Ligands

in contact, ≤ 4 Å

(1S)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PENTANOYLOXY)METHYL]ETHYL OCTANOATEAGA
drugDrugBank DB07349
PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3,4,5,6,-TETRAHYDRO-PTERIDIN-6-YL)-2-HYDROXY-3,4-DIMERCAPTO-BUT-3-EN-YL ESTER GUANYLATE ESTERMD1

Pfam Families

PF14710Nitr_red_alph_N

Respiratory nitrate reductase alpha N-terminal

ClanCL03444Fe-4S

External Links

ECOD PDB View: 1Y5N RCSB PDB: 1Y5N PDBe: 1Y5N UniProt: P09152

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Iron/sulfur clusterSF4

MOLYBDENUM(VI) ION6MO

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.