ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5f5hA1 - ECOD Domain | ECOD

ECOD/Domains/e5f5hA1

e5f5hA1

UID: 001878458

PDB

Range: A:178-270
PDB: 5F5H chain A(all domains)
UniProt: Q4VGL6 (all domains)
Gene: Rc3h1

Molecule: Roquin-1

3D Structure

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Related Domains

Browse other domains in Roquin_1_2-like_ROQ →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyRoquin_1_2-like_ROQ(101.1.2.188)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21206Roquin_1_2-like_ROQ

Roquin 1/2-like, ROQ domain

ClanCL0123HTH

External Links

ECOD PDB View: 5F5H RCSB PDB: 5F5H PDBe: 5F5H UniProt: Q4VGL6

Downloads

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