ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rsoA1 - ECOD Domain | ECOD

ECOD/Domains/e4rsoA1

e4rsoA1

UID: 001878740

PDB

Range: A:217-736
PDB: 4RSO chain A(all domains)
UniProt: Q808Y3 (all domains)
Gene: VP1

Molecule: Capsid protein VP1

3D Structure

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Related Domains

Browse other domains in Parvo_coat →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyParvo_coat(10.2.1.9)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Chloride ionCL
within 5 Å only
2'-DEOXYADENOSINE-5'-MONOPHOSPHATED5M

Pfam Families

Parvovirus coat protein VP1/VP2

ClanCL0605ssDNA_NP_VP

External Links

ECOD PDB View: 4RSO RCSB PDB: 4RSO PDBe: 4RSO UniProt: Q808Y3

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.