ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5e9gC1 - ECOD Domain | ECOD

ECOD/Domains/e5e9gC1

e5e9gC1

UID: 001878838

PDB

Range: C:5-527
PDB: 5E9G chain C(all domains)
UniProt: P0CT06 (all domains)
Gene: ICL1

Molecule: Isocitrate lyase

3D Structure

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Related Domains

Browse other domains in ICL →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyICL(2002.1.1.22)

Ligands

in contact, ≤ 4 Å

Glyoxylic acidGLV
drugDrugBank DB04343
Magnesium ionMG
metal

+ 1 additive (Glycerin)

Pfam Families

Isocitrate lyase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5E9G RCSB PDB: 5E9G PDBe: 5E9G UniProt: P0CT06

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.