ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5erlB1 - ECOD Domain | ECOD

ECOD/Domains/e5erlB1

e5erlB1

UID: 001879081

PDB

Range: B:17-272
PDB: 5ERL chain B(all domains)
UniProt: Q9RN67 (all domains)
Gene: snoN

Molecule: SnoN,SnoN

3D Structure

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Related Domains

Browse other domains in PhyH →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyPhyH(10.12.1.25)

Ligands

in contact, ≤ 4 Å

Succinic acidSIN
drugDrugBank DB00139
Nogalamycin RO5R6
NICKEL (II) IONNI

Pfam Families

Phytanoyl-CoA dioxygenase (PhyH)

ClanCL0029Cupin

External Links

ECOD PDB View: 5ERL RCSB PDB: 5ERL PDBe: 5ERL UniProt: Q9RN67

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.