ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5bvuA1 - ECOD Domain | ECOD

ECOD/Domains/e5bvuA1

e5bvuA1

UID: 001879286

RepresentativePDB

Range: A:452-801
PDB: 5BVU chain A(all domains)
UniProt: F6BL85 (all domains)
Gene: Thexy_2211

Molecule: beta-glucosidase

3D Structure

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Related Domains

Browse other domains in DUF608 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyDUF608(109.2.1.14)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04685GH116_catalytic

Glycosyl-hydrolase family 116, catalytic region

ClanCL00596_Hairpin

External Links

ECOD PDB View: 5BVU RCSB PDB: 5BVU PDBe: 5BVU UniProt: F6BL85

Downloads

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