ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fyqA1 - ECOD Domain | ECOD

ECOD/Domains/e5fyqA1

e5fyqA1

UID: 001879618

PDB

Range: A:56-188,A:233-356
PDB: 5FYQ chain A(all domains)
UniProt: Q8IXJ6 (all domains)
Gene: SIRT2

Molecule: NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-2

3D Structure

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Related Domains

Browse other domains in SIR2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilySIR2(2003.1.4.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Sir2 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5FYQ RCSB PDB: 5FYQ PDBe: 5FYQ UniProt: Q8IXJ6

Downloads

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