ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5izrB1 - ECOD Domain | ECOD

ECOD/Domains/e5izrB1

e5izrB1

UID: 001883195

PDB

Range: B:276-537,B:575-615,B:640-807
PDB: 5IZR chain B(all domains)
UniProt: Q86XP0 (all domains)
Gene: PLA2G4D

Molecule: Cytosolic phospholipase A2 delta

3D Structure

Loading viewer...

Related Domains

Browse other domains in PLA2_B →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupFabD/lysophospholipase-like(2007.1.19)

FFamilyPLA2_B(2007.1.19.3)

Ligands

in contact, ≤ 4 Å

methyl (R)-(6Z,9Z,12Z)-octadeca-6,9,12-trien-1-ylphosphonofluoridate7FA
TERBIUM(III) IONTB
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Lysophospholipase catalytic domain

ClanCL0323Patatin

External Links

ECOD PDB View: 5IZR RCSB PDB: 5IZR PDBe: 5IZR UniProt: Q86XP0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure