ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5izrD2 - ECOD Domain | ECOD

ECOD/Domains/e5izrD2

e5izrD2

UID: 001883202

PDB

Range: D:276-534,D:575-615,D:640-807
PDB: 5IZR chain D(all domains)
UniProt: Q86XP0 (all domains)
Gene: PLA2G4D

Molecule: Cytosolic phospholipase A2 delta

3D Structure

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Related Domains

Browse other domains in PLA2_B →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupFabD/lysophospholipase-like(2007.1.19)

FFamilyPLA2_B(2007.1.19.3)

Ligands

in contact, ≤ 4 Å

methyl (R)-(6Z,9Z,12Z)-octadeca-6,9,12-trien-1-ylphosphonofluoridate7FA
TERBIUM(III) IONTB
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Lysophospholipase catalytic domain

ClanCL0323Patatin

External Links

ECOD PDB View: 5IZR RCSB PDB: 5IZR PDBe: 5IZR UniProt: Q86XP0

Downloads

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