ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lpcA1 - ECOD Domain | ECOD

ECOD/Domains/e5lpcA1

e5lpcA1

UID: 001883375

RepresentativePDB

Range: A:1-639
PDB: 5LPC chain A(all domains)
UniProt: B0C4R0 (all domains)
Gene: AM1_4975

Molecule: Vanadium-dependent bromoperoxidase

3D Structure

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Related Domains

Browse other domains in VCPO_2nd →

Classification

AArchitecturealpha bundles(a.7)

XX-groupAcid phosphatase/Vanadium-dependent haloperoxidase(180)

HH-groupAcid phosphatase/Vanadium-dependent haloperoxidase(180.1)

TT-groupAcid phosphatase/Vanadium-dependent haloperoxidase(180.1.1)

FFamilyVCPO_2nd(180.1.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22778VCPO_2nd

VCPO second helical-bundle domain

ClanCL0525pap2

External Links

ECOD PDB View: 5LPC RCSB PDB: 5LPC PDBe: 5LPC UniProt: B0C4R0

Downloads

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