ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ddiR2 - ECOD Domain | ECOD

ECOD/Domains/e5ddiR2

e5ddiR2

UID: 001883456

PDB

Range: R:149-312
PDB: 5DDI chain R(all domains)
UniProt: P00355 (all domains)
Gene: GAPDH

Molecule: Glyceraldehyde-3-phosphate dehydrogenase

3D Structure

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Related Domains

Browse other domains in Gp_dh_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFwdE/GAPDH domain-like(298)

HH-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1)

TT-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1.1)

FFamilyGp_dh_C(298.1.1.7)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF02800Gp_dh_C

Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain

ClanCL0139GADPH_aa-bio_dh

External Links

ECOD PDB View: 5DDI RCSB PDB: 5DDI PDBe: 5DDI UniProt: P00355

Downloads

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Drug annotations from DrugDomain.