ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5itsA1 - ECOD Domain | ECOD

ECOD/Domains/e5itsA1

e5itsA1

UID: 001883568

PDB

Range: A:9-191
PDB: 5ITS chain A(all domains)
UniProt: Q8NN34 (all domains)
Gene: Cgl2379

Molecule: Cytokinin riboside 5'-monophosphate phosphoribohydrolase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Lysine_decarbox →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMCP/YpsA-related(7563)

HH-groupMCP/YpsA-related(7563.1)

TT-groupMCP/YpsA-related(7563.1.1)

FFamilyLysine_decarbox(7563.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03641Lysine_decarbox

Possible lysine decarboxylase

ClanCL0349SLOG

External Links

ECOD PDB View: 5ITS RCSB PDB: 5ITS PDBe: 5ITS UniProt: Q8NN34

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure