ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lpgA1 - ECOD Domain | ECOD

ECOD/Domains/e5lpgA1

e5lpgA1

UID: 001883858

PDB

Range: A:9-164
PDB: 5LPG chain A(all domains)
UniProt: Q9NV35 (all domains)
Gene: NUDT15

Molecule: Probable 8-oxo-dGTP diphosphatase NUDT15

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-sulfanyl-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate71V
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 5LPG RCSB PDB: 5LPG PDBe: 5LPG UniProt: Q9NV35

Downloads

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