ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kmhD1 - ECOD Domain | ECOD

ECOD/Domains/e5kmhD1

e5kmhD1

UID: 001884091

PDB

Range: D:1001-1219
PDB: 5KMH chain D(all domains)
UniProt: A8EVM5 (all domains)
Gene: Abu_1752

Molecule: Ion transport protein

3D Structure

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Related Domains

Browse other domains in Ion_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans(5054.1.1.2)

Ligands

in contact, ≤ 4 Å

(2~{R})-2-(2-bromophenyl)-5-[2-(3,4-dimethoxyphenyl)ethyl-methyl-amino]-2-propan-2-yl-pentanenitrile6U8
Calcium ionCA
metal
1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINEMC3

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

External Links

ECOD PDB View: 5KMH RCSB PDB: 5KMH PDBe: 5KMH UniProt: A8EVM5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHATEPX6

Shown in the structure viewer. Drug annotations from DrugDomain.