ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5df0B1 - ECOD Domain | ECOD

ECOD/Domains/e5df0B1

e5df0B1

UID: 001884642

PDB

Range: B:124-434,B:506-545
PDB: 5DF0 chain B(all domains)
UniProt: Q70SQ1 (all domains)
Gene: ChiA

Molecule: Ac-ChiA

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_18 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_18(2002.1.1.30)

Ligands

in contact, ≤ 4 Å

(2R,3aR,5R,6R,7R,7aR)-5-(hydroxymethyl)-2-methylhexahydro-3aH-pyrano[3,2-d][1,3]thiazole-6,7-diol58Y
2-acetamido-2-deoxy-beta-D-glucopyranoseNAG
2-deoxy-2-(ethanethioylamino)-beta-D-glucopyranoseSN5

+ 1 additive (Sulfate ion)

Pfam Families

PF00704Glyco_hydro_18

Glycosyl hydrolases family 18

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5DF0 RCSB PDB: 5DF0 PDBe: 5DF0 UniProt: Q70SQ1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.