ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5e0fA1 - ECOD Domain | ECOD

ECOD/Domains/e5e0fA1

e5e0fA1

UID: 001884657

PDB

Range: A:1-403
PDB: 5E0F chain A(all domains)
UniProt: P04746 (all domains)
Gene: AMY2A

Molecule: Pancreatic alpha-amylase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Ligands

in contact, ≤ 4 Å

5,7-dihydroxy-4-oxo-2-(3,4,5-trihydroxyphenyl)-4H-chromen-3-yl 6-deoxy-2-O-{6-O-[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]-beta-D-glucopyranosyl}-alpha-L-mannopyranoside5J7
Calcium ionCA
metal
Chloride ion

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5E0F RCSB PDB: 5E0F PDBe: 5E0F UniProt: P04746

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.