ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jjgA1 - ECOD Domain | ECOD

ECOD/Domains/e5jjgA1

e5jjgA1

UID: 001884783

PDB

Range: A:94-191
PDB: 5JJG chain A(all domains)
UniProt: P12815 (all domains)
Gene: Pdcd6

Molecule: Pcalcium-binding protein ALG-2, rogrammed cell death protein 6

3D Structure

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Related Domains

Browse other domains in EF-hand_5, EF-hand_6, EF-hand_7 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupEF-hand(108)

HH-groupEF-hand-related(108.1)

TT-groupEF-hand(108.1.1)

FFamilyEF-hand_5, EF-hand_6, EF-hand_7(108.1.1.99)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Isopropyl alcohol)

Isopropyl alcoholIPA
DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13202EF-hand_5

EF hand

ClanCL0220EF_hand

PF13405EF-hand_6

EF-hand domain

ClanCL0220EF_hand

PF13499EF-hand_7

EF-hand domain pair

ClanCL0220EF_hand

External Links

ECOD PDB View: 5JJG RCSB PDB: 5JJG PDBe: 5JJG UniProt: P12815

Downloads

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