ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5t1pD2 - ECOD Domain | ECOD

ECOD/Domains/e5t1pD2

e5t1pD2

UID: 001885167

PDB

Range: D:133-255
PDB: 5T1P chain D(all domains)

Molecule: ABC transporter, periplasmic substrate-binding protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_6 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_6(7523.1.1.26)

Ligands

in contact, ≤ 4 Å

L-alpha-GlycerophosphorylethanolamineGPE
drugDrugBank DB15872

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13343SBP_bac_6

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 5T1P RCSB PDB: 5T1P PDBe: 5T1P

Downloads

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