ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5i81A2 - ECOD Domain | ECOD

ECOD/Domains/e5i81A2

e5i81A2

UID: 001885529

RepresentativePDB

Range: A:196-611
PDB: 5I81 chain A(all domains)
UniProt: P17405 (all domains)
Gene: SMPD1

Molecule: Sphingomyelin phosphodiesterase

3D Structure

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Related Domains

Browse other domains in Metallophos,ASMase_C →

Classification

AArchitecturea+b four layers(a.13)

XX-groupCarbon-nitrogen hydrolase-like(246)

HH-groupMetallo-dependent phosphatases(246.2)

TT-groupMetallo-dependent phosphatases(246.2.1)

FFamilyMetallophos,ASMase_C(246.2.1.5)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Zinc ionZN
metal
beta-D-mannopyranose

Pfam Families

PF00149Metallophos

Calcineurin-like phosphoesterase

ClanCL0163Calcineurin

PF19272ASMase_C

Acid sphingomyelin phosphodiesterase C-terminal region

External Links

ECOD PDB View: 5I81 RCSB PDB: 5I81 PDBe: 5I81 UniProt: P17405

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.