ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cdeA1 - ECOD Domain | ECOD

ECOD/Domains/e5cdeA1

e5cdeA1

UID: 001885707

PDB

Range: A:165-399
PDB: 5CDE chain A(all domains)
UniProt: Q8P839 (all domains)
Gene: pepQ

Molecule: Proline dipeptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_M24 →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupCreatinase/aminopeptidase-like(283)

HH-groupCreatinase/aminopeptidase(283.1)

TT-groupCreatinase/aminopeptidase(283.1.1)

FFamilyPeptidase_M24(283.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00557Peptidase_M24

Metallopeptidase family M24

External Links

ECOD PDB View: 5CDE RCSB PDB: 5CDE PDBe: 5CDE UniProt: Q8P839

Downloads

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