ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cdeB1 - ECOD Domain | ECOD

ECOD/Domains/e5cdeB1

e5cdeB1

UID: 001885709

PDB

Range: B:25-164
PDB: 5CDE chain B(all domains)
UniProt: Q8P839 (all domains)
Gene: pepQ

Molecule: Proline dipeptidase

3D Structure

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Related Domains

Browse other domains in Creatinase_N →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupCreatinase/prolidase N-terminal domain(2484.3)

TT-groupCreatinase/prolidase N-terminal domain(2484.3.1)

FFamilyCreatinase_N(2484.3.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01321Creatinase_N

Creatinase/Prolidase N-terminal domain

ClanCL0356AMP_N-like

External Links

ECOD PDB View: 5CDE RCSB PDB: 5CDE PDBe: 5CDE UniProt: Q8P839

Downloads

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