ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cm0A1 - ECOD Domain | ECOD

ECOD/Domains/e5cm0A1

e5cm0A1

UID: 001885711

PDB

Range: A:129-292
PDB: 5CM0 chain A(all domains)
UniProt: A0A0A7GJ30 (all domains)
Gene: ilvE

Molecule: Branched-chain transaminase

3D Structure

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Related Domains

Browse other domains in Aminotran_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbarrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4045)

HH-groupbarrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4045.1)

TT-groupbarrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4045.1.1)

FFamilyAminotran_4(4045.1.1.1)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF01063Aminotran_4

Amino-transferase class IV

External Links

ECOD PDB View: 5CM0 RCSB PDB: 5CM0 PDBe: 5CM0 UniProt: A0A0A7GJ30

Downloads

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Drug annotations from DrugDomain.