ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5dhqA1 - ECOD Domain | ECOD

ECOD/Domains/e5dhqA1

e5dhqA1

UID: 001885795

PDB

Range: A:96-264
PDB: 5DHQ chain A(all domains)
UniProt: Q8Y8D7 (all domains)
Gene: nadK1

Molecule: NAD kinase 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in NAD_kinase_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupNAD kinase beta sandwich domain-like(4004)

HH-groupNAD kinase beta sandwich domain-like(4004.1)

TT-groupNAD kinase beta sandwich domain-like(4004.1.1)

FFamilyNAD_kinase_C(4004.1.1.3)

Ligands

in contact, ≤ 4 Å

8-[(2-{[2-(3-bromophenyl)ethyl]amino}-2-oxoethyl)sulfanyl]adenosine5AK

+ 2 additives (Citric acid, Glycerin)

Citric acidCIT
DrugBank DB04272
GlycerinGOL

Pfam Families

PF20143NAD_kinase_C

ATP-NAD kinase C-terminal domain

ClanCL0701NAD_kinase_C

External Links

ECOD PDB View: 5DHQ RCSB PDB: 5DHQ PDBe: 5DHQ UniProt: Q8Y8D7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.