ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dhsA1 - ECOD Domain | ECOD

ECOD/Domains/e5dhsA1

e5dhsA1

UID: 001885811

PDB

Range: A:96-264
PDB: 5DHS chain A(all domains)
UniProt: Q8Y8D7 (all domains)
Gene: nadK1

Molecule: NAD kinase 1

3D Structure

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Related Domains

Browse other domains in NAD_kinase_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupNAD kinase beta sandwich domain-like(4004)

HH-groupNAD kinase beta sandwich domain-like(4004.1)

TT-groupNAD kinase beta sandwich domain-like(4004.1.1)

FFamilyNAD_kinase_C(4004.1.1.3)

Ligands

in contact, ≤ 4 Å

5'-azido-5'-deoxy-8-[(2-{[2-(3-ethynylphenyl)ethyl]amino}-2-oxoethyl)sulfanyl]adenosine5AG

+ 2 additives (Citric acid, Glycerin)

Citric acidCIT
DrugBank DB04272
Glycerin

Pfam Families

PF20143NAD_kinase_C

ATP-NAD kinase C-terminal domain

ClanCL0701NAD_kinase_C

External Links

ECOD PDB View: 5DHS RCSB PDB: 5DHS PDBe: 5DHS UniProt: Q8Y8D7

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.