ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dhtD2 - ECOD Domain | ECOD

ECOD/Domains/e5dhtD2

e5dhtD2

UID: 001885826

PDB

Range: D:3-95
PDB: 5DHT chain D(all domains)
UniProt: Q8Y8D7 (all domains)
Gene: nadK1

Molecule: NAD kinase 1

3D Structure

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Related Domains

Browse other domains in NAD_kinase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPhosphofructokinase N-terminal domain(2007.1.4)

FFamilyNAD_kinase(2007.1.4.3)

Ligands

in contact, ≤ 4 Å

5'-azido-8-[(2-{[2-(3-bromophenyl)ethyl]amino}-2-oxoethyl)sulfanyl]-5'-deoxyadenosine5A9
within 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF01513NAD_kinase

ATP-NAD kinase N-terminal domain

ClanCL0240PFK

External Links

ECOD PDB View: 5DHT RCSB PDB: 5DHT PDBe: 5DHT UniProt: Q8Y8D7

Downloads

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Drug annotations from DrugDomain.