ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dpmA1 - ECOD Domain | ECOD

ECOD/Domains/e5dpmA1

e5dpmA1

UID: 001886690

PDB

Range: A:10-240
PDB: 5DPM chain A(all domains)
UniProt: A8A296 (all domains)
Gene: ubiG

Molecule: Ubiquinone biosynthesis O-methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_23 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_23(2003.1.5.79)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13489Methyltransf_23

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5DPM RCSB PDB: 5DPM PDBe: 5DPM UniProt: A8A296

Downloads

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