ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dzfB1 - ECOD Domain | ECOD

ECOD/Domains/e5dzfB1

e5dzfB1

UID: 001886711

PDB

Range: B:10-207
PDB: 5DZF chain B(all domains)
UniProt: F6I323 (all domains)
Gene: VIT_15s0048g01850

Molecule: endo-glucanase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_16 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyGlyco_hydro_16(10.1.1.11)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00722Glyco_hydro_16

Glycosyl hydrolases family 16

ClanCL0004Concanavalin

External Links

ECOD PDB View: 5DZF RCSB PDB: 5DZF PDBe: 5DZF UniProt: F6I323

Downloads

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Drug annotations from DrugDomain.