ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ld8B1 - ECOD Domain | ECOD

ECOD/Domains/e5ld8B1

e5ld8B1

UID: 001887180

PDB

Range: B:4-259
PDB: 5LD8 chain B(all domains)
UniProt: P9WQD9 (all domains)
Gene: kasA

Molecule: 3-oxoacyl-[acyl-carrier-protein] synthase 1

3D Structure

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Related Domains

Browse other domains in Thiolase_N, ketoacyl-synt →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiolase-like(7581)

HH-groupThiolase-like(7581.1)

TT-groupThiolase-like(7581.1.1)

FFamilyThiolase_N, ketoacyl-synt(7581.1.1.22)

Ligands

in contact, ≤ 4 Å

~{N}-(1-methylindazol-6-yl)butane-1-sulfonamide6U5

+ 1 additive (Tetraethylene glycol)

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00108Thiolase_N

Thiolase, N-terminal domain

ClanCL0046Thiolase

PF00109ketoacyl-synt

Beta-ketoacyl synthase, N-terminal domain

ClanCL0046Thiolase

External Links

ECOD PDB View: 5LD8 RCSB PDB: 5LD8 PDBe: 5LD8 UniProt: P9WQD9

Downloads

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