ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ld8B2 - ECOD Domain | ECOD

ECOD/Domains/e5ld8B2

e5ld8B2

UID: 001887181

PDB

Range: B:260-416
PDB: 5LD8 chain B(all domains)
UniProt: P9WQD9 (all domains)
Gene: kasA

Molecule: 3-oxoacyl-[acyl-carrier-protein] synthase 1

3D Structure

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Related Domains

Browse other domains in Ketoacyl-synt_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiolase-like(7581)

HH-groupThiolase-like(7581.1)

TT-groupThiolase-like(7581.1.1)

FFamilyKetoacyl-synt_C(7581.1.1.7)

Ligands

in contact, ≤ 4 Å

~{N}-(1-methylindazol-6-yl)butane-1-sulfonamide6U5
Sodium ionNA
metal

+ 1 additive (Tetraethylene glycol)

Tetraethylene glycolPG4

Pfam Families

PF02801Ketoacyl-synt_C

Beta-ketoacyl synthase, C-terminal domain

ClanCL0046Thiolase

External Links

ECOD PDB View: 5LD8 RCSB PDB: 5LD8 PDBe: 5LD8 UniProt: P9WQD9

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.