ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5t9jB1 - ECOD Domain | ECOD

ECOD/Domains/e5t9jB1

e5t9jB1

UID: 001887228

PDB

Range: B:2-192
PDB: 5T9J chain B(all domains)
UniProt: Q17RS7 (all domains)
Gene: GEN1

Molecule: Flap endonuclease GEN homolog 1

3D Structure

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Related Domains

Browse other domains in XPG_N,XPG_I →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyXPG_N,XPG_I(2006.1.4.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

XPG N-terminal domain

ClanCL0280PIN

XPG I-region

ClanCL04645_3_exonuc_C

External Links

ECOD PDB View: 5T9J RCSB PDB: 5T9J PDBe: 5T9J UniProt: Q17RS7

Downloads

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