ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dprC1 - ECOD Domain | ECOD

ECOD/Domains/e5dprC1

e5dprC1

UID: 001887586

PDB

Range: C:6-132
PDB: 5DPR chain C(all domains)
UniProt: Q9Y4G2 (all domains)
Gene: PLEKHM1

Molecule: Pleckstrin homology domain-containing family M member 1,Microtubule-associated proteins 1A/1B light chain 3A

3D Structure

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Related Domains

Browse other domains in ATG8 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyATG8(221.1.1.18)

Pfam Families

Autophagy protein Atg8 ubiquitin like

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 5DPR RCSB PDB: 5DPR PDBe: 5DPR UniProt: Q9Y4G2

Downloads

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