ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5g5gC2 - ECOD Domain | ECOD

ECOD/Domains/e5g5gC2

e5g5gC2

UID: 001887794

PDB

Range: C:397-731
PDB: 5G5G chain C(all domains)
UniProt: P77489 (all domains)
Gene: paoC

Molecule: PUTATIVE XANTHINE DEHYDROGENASE YAGS FAD-BINDING SUBUNIT

3D Structure

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Related Domains

Browse other domains in MoCoBD_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMocoBD/DmpA-related(231)

HH-groupMocoBD/DmpA-related(231.1)

TT-groupMolybdenum cofactor-binding domain(231.1.1)

FFamilyMoCoBD_2(231.1.1.2)

Ligands

in contact, ≤ 4 Å

Pterin Cytosine DinucleotideMCN
drugDrugBank DB03300
Dioxo(sulfanyl)molybdenumMOS
drugDrugBank DB03328

Pfam Families

PF20256MoCoBD_2

Molybdopterin cofactor-binding domain

ClanCL0635DmpA_ArgJ

External Links

ECOD PDB View: 5G5G RCSB PDB: 5G5G PDBe: 5G5G UniProt: P77489

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Flavin adenine dinucleotideFAD

drugDrugBank DB03147within 5 Å only

Chloride ionCL

Iodide ionIOD

+ 2 additives (Glycerin, Acetate ion)

GlycerinGOL
DrugBank DB09462
Acetate ionACT

Shown in the structure viewer. Drug annotations from DrugDomain.