ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5j5cA1 - ECOD Domain | ECOD

ECOD/Domains/e5j5cA1

e5j5cA1

UID: 001887873

PDB

Range: A:17-181
PDB: 5J5C chain A(all domains)
UniProt: P40616 (all domains)
Gene: ARL1

Molecule: ADP-ribosylation factor-like protein 1

3D Structure

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Related Domains

Browse other domains in Arf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyArf(2004.1.1.16)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Pfam Families

ADP-ribosylation factor family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5J5C RCSB PDB: 5J5C PDBe: 5J5C UniProt: P40616

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.