ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jczC1 - ECOD Domain | ECOD

ECOD/Domains/e5jczC1

e5jczC1

UID: 001887884

PDB

Range: C:1469-1634,C:1656-1853
PDB: 5JCZ chain C(all domains)
UniProt: Q9Y4I1 (all domains)
Gene: MYO5A

Molecule: Unconventional myosin-Va

3D Structure

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Related Domains

Browse other domains in DIL →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyDIL(109.4.1.25)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 2 additives (Acetate, 1,2-ETHANEDIOL)

AcetateACT
DrugBank DB14511
1,2-ETHANEDIOL

Pfam Families

DIL domain

ClanCL0020TPR

External Links

ECOD PDB View: 5JCZ RCSB PDB: 5JCZ PDBe: 5JCZ UniProt: Q9Y4I1

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.