ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5knnD1 - ECOD Domain | ECOD

ECOD/Domains/e5knnD1

e5knnD1

UID: 001887993

PDB

Range: D:4-258
PDB: 5KNN chain D(all domains)
UniProt: P49588 (all domains)
Gene: AARS1

Molecule: Alanine--tRNA ligase, cytoplasmic

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2c →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2c(314.1.1.4)

Ligands

in contact, ≤ 4 Å

5'-O-(N-(Alanyl)sulfamoyl)adenosineA5A
drugDrugBank DB03376

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01411tRNA-synt_2c

tRNA synthetases class II (A)

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 5KNN RCSB PDB: 5KNN PDBe: 5KNN UniProt: P49588

Downloads

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