ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kk4F1 - ECOD Domain | ECOD

ECOD/Domains/e5kk4F1

e5kk4F1

UID: 001888935

PDB

Range: F:0-47
PDB: 5KK4 chain F(all domains)
UniProt: C0HK49 (all domains)

Molecule: NsD7

3D Structure

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Related Domains

Browse other domains in Gamma-thionin →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupomega toxin-like(387)

HH-groupomega toxin-related(387.1)

TT-groupScorpion toxin-like(387.1.5)

FFamilyGamma-thionin(387.1.5.1)

Ligands

in contact, ≤ 4 Å

(2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate44E

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00304Gamma-thionin

Gamma-thionin family

ClanCL0054Knottin_1

External Links

ECOD PDB View: 5KK4 RCSB PDB: 5KK4 PDBe: 5KK4 UniProt: C0HK49

Downloads

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