ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lmoX1 - ECOD Domain | ECOD

ECOD/Domains/e5lmoX1

e5lmoX1

UID: 001889087

PDB

Range: X:83-170
PDB: 5LMO chain X(all domains)
UniProt: Q5SKU2 (all domains)
Gene: infC

Molecule: Translation initiation factor IF-3

3D Structure

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Related Domains

Browse other domains in IF3_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupIF3-like(328)

HH-groupTranslation initiation factor IF3, C-terminal domain(328.3)

TT-groupTranslation initiation factor IF3, C-terminal domain(328.3.1)

FFamilyIF3_C(328.3.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateA
drugDrugBank DB00131within 5 Å only
Guanosine-5'-MonophosphateG
drugDrugBank DB01972

Pfam Families

Translation initiation factor IF-3, C-terminal domain

External Links

ECOD PDB View: 5LMO RCSB PDB: 5LMO PDBe: 5LMO UniProt: Q5SKU2

Downloads

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within 5 Å only

Uridine monophosphateU

drugDrugBank DB03685within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.