ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5d08A1 - ECOD Domain | ECOD

ECOD/Domains/e5d08A1

e5d08A1

UID: 001889996

RepresentativePDB

Range: A:2-186
PDB: 5D08 chain A(all domains)
UniProt: P97030 (all domains)
Gene: queG

Molecule: Epoxyqueuosine reductase

3D Structure

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Related Domains

Browse other domains in QueG_DUF1730 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFMN-dependent nitroreductase-like(304.103)

TT-groupFMN-dependent nitroreductase-like(304.103.1)

FFamilyQueG_DUF1730(304.103.1.2)

Ligands

in contact, ≤ 4 Å

CobalaminB12
Chloride ionCL
Iron/sulfur clusterSF4

+ 2 additives (Glycerin, Phosphate ion)

Glycerin

Pfam Families

PF08331QueG_DUF1730

Epoxyqueuosine reductase QueG, DUF1730

External Links

ECOD PDB View: 5D08 RCSB PDB: 5D08 PDBe: 5D08 UniProt: P97030

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Phosphate ionPO4

Shown in the structure viewer. Drug annotations from DrugDomain.