ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kvqB1 - ECOD Domain | ECOD

ECOD/Domains/e5kvqB1

e5kvqB1

UID: 001890029

RepresentativePDB

Range: B:4-127,B:284-358
PDB: 5KVQ chain B(all domains)
UniProt: A0A0T9SSV9 (all domains)

Molecule: Irp3 protein

3D Structure

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Related Domains

Browse other domains in GFO_IDH_MocA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyGFO_IDH_MocA(2003.1.1.22)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01408GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5KVQ RCSB PDB: 5KVQ PDBe: 5KVQ UniProt: A0A0T9SSV9

Downloads

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