ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5sv0A1 - ECOD Domain | ECOD

ECOD/Domains/e5sv0A1

e5sv0A1

UID: 001890045

RepresentativePDB

Range: A:2-234
PDB: 5SV0 chain A(all domains)
UniProt: P0ABU7 (all domains)
Gene: exbB

Molecule: Biopolymer transport protein ExbB

3D Structure

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Related Domains

Browse other domains in MotA_ExbB →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBacterial hemolysins-like(3758)

HH-groupBiopolymer transport protein ExbB(3758.2)

TT-groupBiopolymer transport protein ExbB(3758.2.1)

FFamilyMotA_ExbB(3758.2.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metalwithin 5 Å only

+ 1 additive (HEPES)

HEPESEPE
DrugBank DB16872within 5 Å only

Shown in the structure viewer.

Pfam Families

PF01618MotA_ExbB

MotA/TolQ/ExbB proton channel family

External Links

ECOD PDB View: 5SV0 RCSB PDB: 5SV0 PDBe: 5SV0 UniProt: P0ABU7

Downloads

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Drug annotations from DrugDomain.