ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c4vE1 - ECOD Domain | ECOD

ECOD/Domains/e5c4vE1

e5c4vE1

UID: 001890194

PDB

Range: E:319-463,E:492-542
PDB: 5C4V chain E(all domains)
UniProt: Q13485 (all domains)
Gene: SMAD4

Molecule: Mothers against decapentaplegic homolog 4

3D Structure

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Related Domains

Browse other domains in MH2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupSMAD/FHA domain(73)

HH-groupSMAD/FHA domain(73.1)

TT-groupSMAD/FHA domain(73.1.1)

FFamilyMH2(73.1.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

MH2 domain

ClanCL0357SMAD-FHA

External Links

ECOD PDB View: 5C4V RCSB PDB: 5C4V PDBe: 5C4V UniProt: Q13485

Downloads

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