ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5eyiA2 - ECOD Domain | ECOD

ECOD/Domains/e5eyiA2

e5eyiA2

UID: 001890249

PDB

Range: A:99-222
PDB: 5EYI chain A(all domains)
UniProt: Q9YN02 (all domains)
Gene: rep

Molecule: Non-structural protein 11

3D Structure

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Related Domains

Browse other domains in CoV_NSP15_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupRNase A-like(372)

HH-groupEndoU-like(372.2)

TT-groupEndoU-like(372.2.1)

FFamilyCoV_NSP15_C(372.2.1.2)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF19215CoV_NSP15_C

Coronavirus replicase NSP15, uridylate-specific endoribonuclease

ClanCL0695EndoU

External Links

ECOD PDB View: 5EYI RCSB PDB: 5EYI PDBe: 5EYI UniProt: Q9YN02

Downloads

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