ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kkzL1 - ECOD Domain | ECOD

ECOD/Domains/e5kkzL1

e5kkzL1

UID: 001890525

PDB

Range: L:1-256
PDB: 5KKZ chain L(all domains)
UniProt: Q02760 (all domains)
Gene: petC

Molecule: Cytochrome c1

3D Structure

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Related Domains

Browse other domains in Cytochrom_C1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrom_C1(107.1.1.2)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317
Strontium ionSR
metal

+ 1 additive (octyl beta-D-glucopyranoside)

Pfam Families

PF02167Cytochrom_C1

Cytochrome C1 family

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 5KKZ RCSB PDB: 5KKZ PDBe: 5KKZ UniProt: Q02760

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

octyl beta-D-glucopyranoside

Shown in the structure viewer. Drug annotations from DrugDomain.